HL_6OSI_066

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GGAUGAC

Length

7 nucleotides

Bulged bases

6OSI|1|RA|U|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_066 not in the Motif Atlas

Geometric match to HL_7RQB_009

Geometric discrepancy: 0.289

The information below is about HL_7RQB_009

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89098.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

6OSI|1|RA|G|1171
6OSI|1|RA|G|1173
6OSI|1|RA|A|1174
6OSI|1|RA|U|1175
6OSI|1|RA|G|1176
6OSI|1|RA|A|1177
6OSI|1|RA|C|1178

Current chains

Chain RA

23S rRNA

Nearby chains