HL_6OSI_096

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

6OSI|1|RA|U|2473

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_096 not in the Motif Atlas

Homologous match to HL_7A0S_059

Geometric discrepancy: 0.2521

The information below is about HL_7A0S_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6OSI|1|RA|C|2471
6OSI|1|RA|G|2472
6OSI|1|RA|U|2473
6OSI|1|RA|C|2474
6OSI|1|RA|C|2475
6OSI|1|RA|A|2476
6OSI|1|RA|C|2477
6OSI|1|RA|A|2478
6OSI|1|RA|G|2479

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R9

50S ribosomal protein L36

Chain RQ

50S ribosomal protein L16