HL_6OSI_113

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GGGUAAUGGCC

Length

11 nucleotides

Bulged bases

6OSI|1|XA|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_113 not in the Motif Atlas

Geometric match to HL_4WSM_226

Geometric discrepancy: 0.3799

The information below is about HL_4WSM_226

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22031.2

Basepair signature

cWW-cWW-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6OSI|1|XA|G|258
6OSI|1|XA|G|259
6OSI|1|XA|G|260
6OSI|1|XA|U|261
6OSI|1|XA|A|262
6OSI|1|XA|A|263
6OSI|1|XA|U|264
6OSI|1|XA|G|265
6OSI|1|XA|G|266
6OSI|1|XA|C|267
6OSI|1|XA|C|268

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XQ

30S ribosomal protein S17

Chain XT

30S ribosomal protein S20