#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 81-82-72-83-63-74-66-7
1 HL_4V9I_0404V9I0.47333 AY tRNAC52A53A54C55C57U58C61G62cWWncWW
2 HL_4V7M_0404V7M0.44543 AY tRNAG51G52U53U54G56A57C60C61cWWntWHncWW
3 HL_4WT8_1374WT80.38623 C3 tRNAG52G53U54U55G57A58C61C62cWWncWWncWW
4 HL_1P6V_0021P6V0.00003 B45-MERG44G45U46U47G49A50C53C54cWWcWWntWWncWW
5 HL_4WSM_2264WSM0.37713 3L tRNAG63G64U65U66A68A69C72C73cWWncWWtWHncWW
6 HL_6DME_0036DME0.60023 AppGpp RiboswitchG78G79A80U81A83A84A87C88cWWcWWtWH
7 HL_7A0S_0097A0S0.85834 X LSU rRNAA254A255C256G257C262G263U264U265cWWncWWncWWncWWncWWncSH

3D structures

Complete motif including flanking bases
SequenceCounts
GGUUCGAUUCC2
CAACUCUACCG1
GGUUCGAAUCC1
GGUUCAAGUCC1
GGAUAAAAGAC1
AACGCUUGCGUU1
Non-Watson-Crick part of the motif
SequenceCounts
GUUCGAUUC2
AACUCUACC1
GUUCGAAUC1
GUUCAAGUC1
GAUAAAAGA1
ACGCUUGCGU1

Release history

Release3.843.853.863.87
Date2024-05-222024-06-192024-07-172024-08-14
StatusUpdated, 2 parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cWW-F-F-F-F
Heat map statistics
Min 0.30 | Avg 0.49 | Max 0.88
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Coloring options:

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