HL_6OSI_122

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_122 not in the Motif Atlas

Homologous match to HL_5J7L_015

Geometric discrepancy: 0.1289

The information below is about HL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

6OSI|1|XA|C|689
6OSI|1|XA|G|690
6OSI|1|XA|G|691
6OSI|1|XA|U|692
6OSI|1|XA|G|693
6OSI|1|XA|A|694
6OSI|1|XA|A|695
6OSI|1|XA|A|696
6OSI|1|XA|U|697
6OSI|1|XA|G|698

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XK

30S ribosomal protein S11

Chain XV

Transfer RNA; tRNA

Chain XX

mRNA