3D structure

PDB id
6OSI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
4.14 Å

Loop

Sequence
GUUAAGUC
Length
8 nucleotides
Bulged bases
6OSI|1|XA|G|1094
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OSI_132 not in the Motif Atlas
Homologous match to HL_6CZR_096
Geometric discrepancy: 0.2442
The information below is about HL_6CZR_096
Detailed Annotation
T-loop related
Broad Annotation
T-loop
Motif group
HL_77436.4
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
24

Unit IDs

6OSI|1|XA|G|1089
6OSI|1|XA|U|1090
6OSI|1|XA|U|1091
6OSI|1|XA|A|1092
6OSI|1|XA|A|1093
6OSI|1|XA|G|1094
6OSI|1|XA|U|1095
6OSI|1|XA|C|1096

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XB
30S ribosomal protein S2
Chain XG
30S ribosomal protein S7

Coloring options:


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