HL_6OSI_180

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

6OSI|1|YA|C|1493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_180 not in the Motif Atlas

Homologous match to HL_7RQB_038

Geometric discrepancy: 0.1874

The information below is about HL_7RQB_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

6OSI|1|YA|G|1492
6OSI|1|YA|C|1493
6OSI|1|YA|A|1494
6OSI|1|YA|A|1495
6OSI|1|YA|A|1496
6OSI|1|YA|U|1497
6OSI|1|YA|C|1498

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YD

50S ribosomal protein L2