HL_6OSI_219

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

AGAAAU

Length

6 nucleotides

Bulged bases

6OSI|1|RA|A|229

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_219 not in the Motif Atlas

Homologous match to HL_7A0S_007

Geometric discrepancy: 0.4953

The information below is about HL_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

6OSI|1|RA|A|225
6OSI|1|RA|G|226
6OSI|1|RA|A|227
6OSI|1|RA|A|228
6OSI|1|RA|A|229
6OSI|1|RA|U|230

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RP

50S ribosomal protein L15