HL_6OSI_232

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

GAAGCAACGC

Length

10 nucleotides

Bulged bases

6OSI|1|XA|G|966, 6OSI|1|XA|G|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSI_232 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.5483

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6OSI|1|XA|G|963
6OSI|1|XA|A|964
6OSI|1|XA|A|965
6OSI|1|XA|G|966
6OSI|1|XA|C|967
6OSI|1|XA|A|968
6OSI|1|XA|A|969
6OSI|1|XA|C|970
6OSI|1|XA|G|971
6OSI|1|XA|C|972

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XJ

30S ribosomal protein S10

Chain XN

30S ribosomal protein S14 type Z