HL_6OSK_094

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGUCCGGCC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OSK_094 not in the Motif Atlas

Geometric match to HL_5TBW_021

Geometric discrepancy: 0.3236

The information below is about HL_5TBW_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56443.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6OSK|1|2|G|1133
6OSK|1|2|G|1134
6OSK|1|2|U|1135
6OSK|1|2|C|1136
6OSK|1|2|C|1137
6OSK|1|2|G|1138
6OSK|1|2|G|1139
6OSK|1|2|C|1140
6OSK|1|2|C|1141

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S9