3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GAUCAGAAUGC
Length
11 nucleotides
Bulged bases
6OSK|1|2|U|1364
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OSK_098 not in the Motif Atlas
Homologous match to HL_4LFB_030
Geometric discrepancy: 0.117
The information below is about HL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06226.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

6OSK|1|2|G|1356
6OSK|1|2|A|1357
6OSK|1|2|U|1358
6OSK|1|2|C|1359
6OSK|1|2|A|1360
6OSK|1|2|G|1361
6OSK|1|2|A|1362
6OSK|1|2|A|1363
6OSK|1|2|U|1364
6OSK|1|2|G|1365
6OSK|1|2|C|1366

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain h
30S ribosomal protein S3
Chain n
30S ribosomal protein S9
Chain o
30S ribosomal protein S10
Chain s
30S ribosomal protein S14

Coloring options:


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