3D structure

PDB id
6OSQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated state bound Release complex 70S at long incubation time point
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGGCGAG
Length
7 nucleotides
Bulged bases
6OSQ|1|1|C|490
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OSQ_015 not in the Motif Atlas
Homologous match to HL_5J7L_148
Geometric discrepancy: 0.0962
The information below is about HL_5J7L_148
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

6OSQ|1|1|C|487
6OSQ|1|1|G|488
6OSQ|1|1|G|489
6OSQ|1|1|C|490
6OSQ|1|1|G|491
6OSQ|1|1|A|492
6OSQ|1|1|G|493

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain S
50S ribosomal protein L22

Coloring options:


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