3D structure

PDB id
6OST (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 pre-accommodated state bound Release complex 70S at 24ms
Experimental method
ELECTRON MICROSCOPY
Resolution
4.2 Å

Loop

Sequence
AGUUCAUAU
Length
9 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OST_059 not in the Motif Atlas
Homologous match to HL_7RQB_060
Geometric discrepancy: 0.1895
The information below is about HL_7RQB_060
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06192.2
Basepair signature
cWW-tSH-F-F
Number of instances in this motif group
14

Unit IDs

6OST|1|1|A|2471
6OST|1|1|G|2472
6OST|1|1|U|2473
6OST|1|1|U|2474
6OST|1|1|C|2475
6OST|1|1|A|2476
6OST|1|1|U|2477
6OST|1|1|A|2478
6OST|1|1|U|2479

Current chains

Chain 1
23S Ribosomal RNA

Nearby chains

Chain F
50S ribosomal protein L6
Chain M
50S ribosomal protein L16
Chain f
50S ribosomal protein L36

Coloring options:


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