HL_6OST_090

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UCAGAGAUGA

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OST_090 not in the Motif Atlas

Geometric match to HL_8KAL_008

Geometric discrepancy: 0.3837

The information below is about HL_8KAL_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6OST|1|2|U|1010
6OST|1|2|C|1011
6OST|1|2|A|1012
6OST|1|2|G|1013
6OST|1|2|A|1014
6OST|1|2|G|1015
6OST|1|2|A|1016
6OST|1|2|U|1017
6OST|1|2|G|1018
6OST|1|2|A|1019

Current chains

Chain 2

16S Ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S14

Chain x

30S ribosomal protein S19