3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
GCGUAAUAGC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OT3_029 not in the Motif Atlas
Homologous match to HL_5J7L_212
Geometric discrepancy: 0.2886
The information below is about HL_5J7L_212
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

6OT3|1|1|G|1091
6OT3|1|1|C|1092
6OT3|1|1|G|1093
6OT3|1|1|U|1094
6OT3|1|1|A|1095
6OT3|1|1|A|1096
6OT3|1|1|U|1097
6OT3|1|1|A|1098
6OT3|1|1|G|1099
6OT3|1|1|C|1100

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain A
Peptide chain release factor 2
Chain F
50S ribosomal protein L6
Chain f
50S ribosomal protein L36

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