HL_6OT3_043

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

6OT3|1|1|U|1729, 6OT3|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OT3_043 not in the Motif Atlas

Geometric match to HL_7A0S_023

Geometric discrepancy: 0.3173

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

6OT3|1|1|C|1727
6OT3|1|1|C|1728
6OT3|1|1|U|1729
6OT3|1|1|C|1730
6OT3|1|1|G|1731
6OT3|1|1|C|1732
6OT3|1|1|G|1733

Current chains

Chain 1

23S ribosomal RNA

Nearby chains