HL_6OT3_054

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

6OT3|1|1|A|2268, 6OT3|1|1|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OT3_054 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0989

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

6OT3|1|1|C|2264
6OT3|1|1|U|2265
6OT3|1|1|A|2266
6OT3|1|1|A|2267
6OT3|1|1|A|2268
6OT3|1|1|G|2269
6OT3|1|1|A|2270
6OT3|1|1|G|2271
6OT3|1|1|U|2272
6OT3|1|1|A|2273
6OT3|1|1|A|2274
6OT3|1|1|C|2275
6OT3|1|1|G|2276

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27