3D structure

PDB id
6OT3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound Release complex 70S at 24 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.9 Å

Loop

Sequence
C(OMU)GUUCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OT3_062 not in the Motif Atlas
Homologous match to HL_7A0S_061
Geometric discrepancy: 0.2328
The information below is about HL_7A0S_061
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

6OT3|1|1|C|2551
6OT3|1|1|OMU|2552
6OT3|1|1|G|2553
6OT3|1|1|U|2554
6OT3|1|1|U|2555
6OT3|1|1|C|2556
6OT3|1|1|G|2557

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain A
Peptide chain release factor 2

Coloring options:


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