HL_6OT3_072

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

UGGAAACG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OT3_072 not in the Motif Atlas

Geometric match to HL_7A0S_056

Geometric discrepancy: 0.311

The information below is about HL_7A0S_056

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_87268.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6OT3|1|2|U|157
6OT3|1|2|G|158
6OT3|1|2|G|159
6OT3|1|2|A|160
6OT3|1|2|A|161
6OT3|1|2|A|162
6OT3|1|2|C|163
6OT3|1|2|G|164

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain y

30S ribosomal protein S20