HL_6OT3_087

3D structure

PDB id

6OT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound Release complex 70S at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

6OT3|1|2|C|841, 6OT3|1|2|U|842, 6OT3|1|2|U|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OT3_087 not in the Motif Atlas

Geometric match to HL_5TBW_022

Geometric discrepancy: 0.3299

The information below is about HL_5TBW_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

6OT3|1|2|C|840
6OT3|1|2|C|841
6OT3|1|2|U|842
6OT3|1|2|U|843
6OT3|1|2|G|844
6OT3|1|2|A|845
6OT3|1|2|G|846

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain w

30S ribosomal protein S18