3D structure

PDB id
6OUO (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF2 accommodated state bound 70S complex at long incubation time
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GGAAAC
Length
6 nucleotides
Bulged bases
6OUO|1|1|A|125
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6OUO_003 not in the Motif Atlas
Homologous match to HL_5J7L_136
Geometric discrepancy: 0.1074
The information below is about HL_5J7L_136
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_82710.2
Basepair signature
cWW-F-F-F
Number of instances in this motif group
4

Unit IDs

6OUO|1|1|G|123
6OUO|1|1|G|124
6OUO|1|1|A|125
6OUO|1|1|A|126
6OUO|1|1|A|127
6OUO|1|1|C|128

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain d
50S ribosomal protein L34

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1132 s