HL_6OUO_077

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OUO_077 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.1615

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

6OUO|1|2|A|320
6OUO|1|2|A|321
6OUO|1|2|C|322
6OUO|1|2|U|323
6OUO|1|2|G|324
6OUO|1|2|A|325
6OUO|1|2|G|326
6OUO|1|2|A|327
6OUO|1|2|C|328
6OUO|1|2|A|329
6OUO|1|2|C|330
6OUO|1|2|G|331
6OUO|1|2|G|332
6OUO|1|2|U|333

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20