HL_6OUO_109

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

6OUO|1|1|U|958, 6OUO|1|1|C|961

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6OUO_109 not in the Motif Atlas

Homologous match to HL_5J7L_211

Geometric discrepancy: 0.1865

The information below is about HL_5J7L_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

6OUO|1|1|PSU|955
6OUO|1|1|G|956
6OUO|1|1|C|957
6OUO|1|1|U|958
6OUO|1|1|A|959
6OUO|1|1|A|960
6OUO|1|1|C|961
6OUO|1|1|G|962

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 3

5S ribosomal RNA; 5S rRNA

Chain M

50S ribosomal protein L16