HL_6P5K_001
3D structure
- PDB id
- 6P5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AUUAGAGGAAAUUUCCAAUAAACUCUGGU
- Length
- 29 nucleotides
- Bulged bases
- 6P5K|1|1|U|6451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6P5K|1|1|A|6438
6P5K|1|1|U|6439
6P5K|1|1|U|6440
6P5K|1|1|A|6441
6P5K|1|1|G|6442
6P5K|1|1|A|6443
6P5K|1|1|G|6444
6P5K|1|1|G|6445
6P5K|1|1|A|6446
6P5K|1|1|A|6447
6P5K|1|1|A|6448
6P5K|1|1|U|6449
6P5K|1|1|U|6450
6P5K|1|1|U|6451
6P5K|1|1|C|6452
6P5K|1|1|C|6453
6P5K|1|1|A|6454
6P5K|1|1|A|6455
6P5K|1|1|U|6456
6P5K|1|1|A|6457
6P5K|1|1|A|6458
6P5K|1|1|A|6459
6P5K|1|1|C|6460
6P5K|1|1|U|6461
6P5K|1|1|C|6462
6P5K|1|1|U|6463
6P5K|1|1|G|6464
6P5K|1|1|G|6465
6P5K|1|1|U|6466
Current chains
- Chain 1
- IAPV-IRES
Nearby chains
- Chain AK
- uL1
- Chain Ao
- eL42
Coloring options: