HL_6PC6_015

3D structure

PDB id

6PC6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 47

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

6PC6|1|I|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6PC6_015 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.1203

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

6PC6|1|I|C|487
6PC6|1|I|G|488
6PC6|1|I|G|489
6PC6|1|I|C|490
6PC6|1|I|G|491
6PC6|1|I|A|492
6PC6|1|I|G|493

Current chains

Chain I

23S ribosomal RNA

Nearby chains