HL_6PC7_053

3D structure

PDB id

6PC7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 46

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

6PC7|1|I|A|2268, 6PC7|1|I|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6PC7_053 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.0824

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

6PC7|1|I|C|2264
6PC7|1|I|U|2265
6PC7|1|I|A|2266
6PC7|1|I|A|2267
6PC7|1|I|A|2268
6PC7|1|I|G|2269
6PC7|1|I|A|2270
6PC7|1|I|G|2271
6PC7|1|I|U|2272
6PC7|1|I|A|2273
6PC7|1|I|A|2274
6PC7|1|I|C|2275
6PC7|1|I|G|2276

Current chains

Chain I

23S ribosomal RNA

Nearby chains