HL_6PCH_029

3D structure

PDB id

6PCH (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound 21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCGUAAUAGC

Length

10 nucleotides

Bulged bases

6PCH|1|I|A|1095

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6PCH_029 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.35

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

6PCH|1|I|G|1091
6PCH|1|I|C|1092
6PCH|1|I|G|1093
6PCH|1|I|U|1094
6PCH|1|I|A|1095
6PCH|1|I|A|1096
6PCH|1|I|U|1097
6PCH|1|I|A|1098
6PCH|1|I|G|1099
6PCH|1|I|C|1100

Current chains

Chain I

23S ribosomal RNA

Nearby chains