HL_6PJ6_050

3D structure

PDB id

6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

High resolution cryo-EM structure of E.coli 50S

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

6PJ6|1|I|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6PJ6_050 not in the Motif Atlas

Homologous match to HL_5J7L_184

Geometric discrepancy: 0.488

The information below is about HL_5J7L_184

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_79299.1

Basepair signature

cWW-tSW-R

Number of instances in this motif group

44

Unit IDs

6PJ6|1|I|C|2143
6PJ6|1|I|G|2144
6PJ6|1|I|C|2145
6PJ6|1|I|C|2146
6PJ6|1|I|A|2147
6PJ6|1|I|G|2148

Current chains

Chain I

23S rRNA

Nearby chains