HL_6PJ6_059
3D structure
- PDB id
- 6PJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High resolution cryo-EM structure of E.coli 50S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- 6PJ6|1|I|U|2473
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6PJ6_059 not in the Motif Atlas
- Homologous match to HL_4WF9_056
- Geometric discrepancy: 0.1673
- The information below is about HL_4WF9_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6PJ6|1|I|A|2471
6PJ6|1|I|G|2472
6PJ6|1|I|U|2473
6PJ6|1|I|U|2474
6PJ6|1|I|C|2475
6PJ6|1|I|A|2476
6PJ6|1|I|U|2477
6PJ6|1|I|A|2478
6PJ6|1|I|U|2479
Current chains
- Chain I
- 23S rRNA
Nearby chains
- Chain O
- 50S ribosomal protein L6
- Chain U
- 50S ribosomal protein L16
- Chain m
- 50S ribosomal protein L36
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