HL_6POM_001
3D structure
- PDB id
- 6POM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the full-length Bacillus subtilis glyQS T-box riboswitch in complex with tRNA-Gly
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.9 Å
Loop
- Sequence
- GGGCGGUGUAAGC
- Length
- 13 nucleotides
- Bulged bases
- 6POM|1|A|G|75
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6POM_001 not in the Motif Atlas
- Geometric match to HL_4MGN_001
- Geometric discrepancy: 0.2145
- The information below is about HL_4MGN_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86109.1
- Basepair signature
- cWW-F-tWH-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
6POM|1|A|G|64
6POM|1|A|G|65
6POM|1|A|G|66
6POM|1|A|C|67
6POM|1|A|G|68
6POM|1|A|G|69
6POM|1|A|U|70
6POM|1|A|G|71
6POM|1|A|U|72
6POM|1|A|A|73
6POM|1|A|A|74
6POM|1|A|G|75
6POM|1|A|C|76
Current chains
- Chain A
- T-box GlyQS leader (155-MER)
Nearby chains
- Chain B
- Transfer RNA; tRNA
Coloring options: