HL_6PRV_007

3D structure

PDB id

6PRV (explore in PDB, NAKB, or RNA 3D Hub)

Description

58nt RNA L11-binding domain from E. coli 23S rRNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.71 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6PRV|1|D|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6PRV_007 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.1493

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6PRV|1|D|C|1064
6PRV|1|D|U|1065
6PRV|1|D|U|1066
6PRV|1|D|A|1067
6PRV|1|D|G|1068
6PRV|1|D|A|1069
6PRV|1|D|A|1070
6PRV|1|D|G|1071
6PRV|1|D|C|1072
6PRV|1|D|A|1073
6PRV|1|D|G|1074

Current chains

Chain D

23S rRNA

Nearby chains