HL_6Q95_054
3D structure
- PDB id
- 6Q95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGACGGAAAUC
- Length
- 11 nucleotides
- Bulged bases
- 6Q95|1|1|A|2311
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6Q95_054 not in the Motif Atlas
- Homologous match to HL_4WF9_051
- Geometric discrepancy: 0.4735
- The information below is about HL_4WF9_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q95|1|1|G|2303
6Q95|1|1|G|2304
6Q95|1|1|A|2305
6Q95|1|1|C|2306
6Q95|1|1|G|2307
6Q95|1|1|G|2308
6Q95|1|1|A|2309
6Q95|1|1|A|2310
6Q95|1|1|A|2311
6Q95|1|1|U|2312
6Q95|1|1|C|2313
Current chains
- Chain 1
- 23S RIBOSOMAL RNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain 7
- Transfer RNA; tRNA
- Chain E
- 50S ribosomal protein L5
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