HL_6Q95_107
3D structure
- PDB id
- 6Q95 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUUCGACUC
- Length
- 9 nucleotides
- Bulged bases
- 6Q95|1|4|C|329, 6Q95|1|4|G|330
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q95|1|4|G|326
6Q95|1|4|U|327
6Q95|1|4|U|328
6Q95|1|4|C|329
6Q95|1|4|G|330
6Q95|1|4|A|331
6Q95|1|4|C|332
6Q95|1|4|U|333
6Q95|1|4|C|334
Current chains
- Chain 4
- transfer-messenger RNA (tmRNA)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 5
- SsrA-binding protein
- Chain M
- 50S ribosomal protein L16
- Chain V
- 50S ribosomal protein L25
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