HL_6Q95_120

3D structure

PDB id

6Q95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound in A site of T. thermophilus 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGGUUAAGUCCC

Length

12 nucleotides

Bulged bases

6Q95|1|2|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q95|1|2|G|1087
6Q95|1|2|G|1088
6Q95|1|2|G|1089
6Q95|1|2|U|1090
6Q95|1|2|U|1091
6Q95|1|2|A|1092
6Q95|1|2|A|1093
6Q95|1|2|G|1094
6Q95|1|2|U|1095
6Q95|1|2|C|1096
6Q95|1|2|C|1097
6Q95|1|2|C|1098

Current chains

Chain 2

16S RIBOSOMAL RNA

Nearby chains

Chain g

30S ribosomal protein S2

Chain l

30S ribosomal protein S7