HL_6Q97_027
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUGGCUUAGAAGCAGCCAUC
- Length
- 21 nucleotides
- Bulged bases
- 6Q97|1|1|U|1061, 6Q97|1|1|A|1070
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|G|1059
6Q97|1|1|U|1060
6Q97|1|1|U|1061
6Q97|1|1|G|1062
6Q97|1|1|G|1063
6Q97|1|1|C|1064
6Q97|1|1|U|1065
6Q97|1|1|U|1066
6Q97|1|1|A|1067
6Q97|1|1|G|1068
6Q97|1|1|A|1069
6Q97|1|1|A|1070
6Q97|1|1|G|1071
6Q97|1|1|C|1072
6Q97|1|1|A|1073
6Q97|1|1|G|1074
6Q97|1|1|C|1075
6Q97|1|1|C|1076
6Q97|1|1|A|1077
6Q97|1|1|U|1078
6Q97|1|1|C|1079
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain H
- 50S ribosomal protein L10
- Chain I
- 50S ribosomal protein L11
- Chain M
- 50S ribosomal protein L16
Coloring options: