HL_6Q97_053
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GACUG(OMG)GGCGGUC
- Length
- 13 nucleotides
- Bulged bases
- 6Q97|1|1|G|2250
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|G|2246
6Q97|1|1|A|2247
6Q97|1|1|C|2248
6Q97|1|1|U|2249
6Q97|1|1|G|2250
6Q97|1|1|OMG|2251
6Q97|1|1|G|2252
6Q97|1|1|G|2253
6Q97|1|1|C|2254
6Q97|1|1|G|2255
6Q97|1|1|G|2256
6Q97|1|1|U|2257
6Q97|1|1|C|2258
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 4
- Transfer-messenger RNA; tmRNA
- Chain 7
- Transfer RNA; tRNA
- Chain M
- 50S ribosomal protein L16
- Chain W
- 50S ribosomal protein L27
Coloring options: