HL_6Q97_115
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- ACGCUUAGGCGU
- Length
- 12 nucleotides
- Bulged bases
- 6Q97|1|1|U|546, 6Q97|1|1|A|547, 6Q97|1|1|G|548, 6Q97|1|1|G|549
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|A|541
6Q97|1|1|C|542
6Q97|1|1|G|543
6Q97|1|1|C|544
6Q97|1|1|U|545
6Q97|1|1|U|546
6Q97|1|1|A|547
6Q97|1|1|G|548
6Q97|1|1|G|549
6Q97|1|1|C|550
6Q97|1|1|G|551
6Q97|1|1|U|552
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L13
- Chain R
- 50S ribosomal protein L21
Coloring options: