HL_6Q97_119
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGCGACGCUUAUGCGUUGUU
- Length
- 20 nucleotides
- Bulged bases
- 6Q97|1|1|U|1173, 6Q97|1|1|U|1174, 6Q97|1|1|A|1175, 6Q97|1|1|U|1176
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|A|1165
6Q97|1|1|G|1166
6Q97|1|1|C|1167
6Q97|1|1|G|1168
6Q97|1|1|A|1169
6Q97|1|1|C|1170
6Q97|1|1|G|1171
6Q97|1|1|C|1172
6Q97|1|1|U|1173
6Q97|1|1|U|1174
6Q97|1|1|A|1175
6Q97|1|1|U|1176
6Q97|1|1|G|1177
6Q97|1|1|C|1178
6Q97|1|1|G|1179
6Q97|1|1|U|1180
6Q97|1|1|U|1181
6Q97|1|1|G|1182
6Q97|1|1|U|1183
6Q97|1|1|U|1184
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain Z
- 50S ribosomal protein L30
Coloring options: