HL_6Q97_123
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCC
- Length
- 35 nucleotides
- Bulged bases
- 6Q97|1|1|U|2132, 6Q97|1|1|A|2135, 6Q97|1|1|C|2145, 6Q97|1|1|C|2146
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|G|2127
6Q97|1|1|G|2128
6Q97|1|1|C|2129
6Q97|1|1|U|2130
6Q97|1|1|U|2131
6Q97|1|1|U|2132
6Q97|1|1|G|2133
6Q97|1|1|A|2134
6Q97|1|1|A|2135
6Q97|1|1|G|2136
6Q97|1|1|U|2137
6Q97|1|1|G|2138
6Q97|1|1|U|2139
6Q97|1|1|G|2140
6Q97|1|1|G|2141
6Q97|1|1|A|2142
6Q97|1|1|C|2143
6Q97|1|1|G|2144
6Q97|1|1|C|2145
6Q97|1|1|C|2146
6Q97|1|1|A|2147
6Q97|1|1|G|2148
6Q97|1|1|U|2149
6Q97|1|1|C|2150
6Q97|1|1|U|2151
6Q97|1|1|G|2152
6Q97|1|1|C|2153
6Q97|1|1|A|2154
6Q97|1|1|U|2155
6Q97|1|1|G|2156
6Q97|1|1|G|2157
6Q97|1|1|A|2158
6Q97|1|1|G|2159
6Q97|1|1|C|2160
6Q97|1|1|C|2161
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 8
- Transfer RNA; tRNA
Coloring options: