HL_6Q97_133
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAAACAGGAUUAGAUACCCUGGUAG
- Length
- 25 nucleotides
- Bulged bases
- 6Q97|1|2|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|2|C|779
6Q97|1|2|A|780
6Q97|1|2|A|781
6Q97|1|2|A|782
6Q97|1|2|C|783
6Q97|1|2|A|784
6Q97|1|2|G|785
6Q97|1|2|G|786
6Q97|1|2|A|787
6Q97|1|2|U|788
6Q97|1|2|U|789
6Q97|1|2|A|790
6Q97|1|2|G|791
6Q97|1|2|A|792
6Q97|1|2|U|793
6Q97|1|2|A|794
6Q97|1|2|C|795
6Q97|1|2|C|796
6Q97|1|2|C|797
6Q97|1|2|U|798
6Q97|1|2|G|799
6Q97|1|2|G|800
6Q97|1|2|U|801
6Q97|1|2|A|802
6Q97|1|2|G|803
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 7
- Transfer RNA; tRNA
- Chain 8
- Transfer RNA; tRNA
- Chain 9
- mRNA
- Chain p
- 30S ribosomal protein S11
- Chain z
- 30S ribosomal protein S21
Coloring options: