HL_6Q97_139
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAUCACUCAUAAUGAUG
- Length
- 17 nucleotides
- Bulged bases
- 6Q97|1|8|U|34, 6Q97|1|8|C|35
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|8|C|28
6Q97|1|8|A|29
6Q97|1|8|U|30
6Q97|1|8|C|31
6Q97|1|8|A|32
6Q97|1|8|C|33
6Q97|1|8|U|34
6Q97|1|8|C|35
6Q97|1|8|A|36
6Q97|1|8|U|37
6Q97|1|8|A|38
6Q97|1|8|A|39
6Q97|1|8|U|40
6Q97|1|8|G|41
6Q97|1|8|A|42
6Q97|1|8|U|43
6Q97|1|8|G|44
Current chains
- Chain 8
- tRNA-Met
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 7
- Transfer RNA; tRNA
- Chain 9
- mRNA
- Chain l
- 30S ribosomal protein S7
- Chain p
- 30S ribosomal protein S11
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