HL_6Q97_143
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- UGCAAACACGAAAGUGGACGUAUA
- Length
- 24 nucleotides
- Bulged bases
- 6Q97|1|1|A|1801, 6Q97|1|1|A|1808, 6Q97|1|1|C|1816, 6Q97|1|1|U|1820
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|1|U|1798
6Q97|1|1|G|1799
6Q97|1|1|C|1800
6Q97|1|1|A|1801
6Q97|1|1|A|1802
6Q97|1|1|A|1803
6Q97|1|1|C|1804
6Q97|1|1|A|1805
6Q97|1|1|C|1806
6Q97|1|1|G|1807
6Q97|1|1|A|1808
6Q97|1|1|A|1809
6Q97|1|1|A|1810
6Q97|1|1|G|1811
6Q97|1|1|U|1812
6Q97|1|1|G|1813
6Q97|1|1|G|1814
6Q97|1|1|A|1815
6Q97|1|1|C|1816
6Q97|1|1|G|1817
6Q97|1|1|U|1818
6Q97|1|1|A|1819
6Q97|1|1|U|1820
6Q97|1|1|A|1821
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain B
- 50S ribosomal protein L2
- Chain X
- 50S ribosomal protein L28
Coloring options: