HL_6Q98_109
3D structure
- PDB id
- 6Q98 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GGGGAACUGAAACAUCUAAGUACCC
- Length
- 25 nucleotides
- Bulged bases
- 6Q98|1|1|A|196, 6Q98|1|1|A|199
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q98|1|1|G|186
6Q98|1|1|G|187
6Q98|1|1|G|188
6Q98|1|1|G|189
6Q98|1|1|A|190
6Q98|1|1|A|191
6Q98|1|1|C|192
6Q98|1|1|U|193
6Q98|1|1|G|194
6Q98|1|1|A|195
6Q98|1|1|A|196
6Q98|1|1|A|197
6Q98|1|1|C|198
6Q98|1|1|A|199
6Q98|1|1|U|200
6Q98|1|1|C|201
6Q98|1|1|U|202
6Q98|1|1|A|203
6Q98|1|1|A|204
6Q98|1|1|G|205
6Q98|1|1|U|206
6Q98|1|1|A|207
6Q98|1|1|C|208
6Q98|1|1|C|209
6Q98|1|1|C|210
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain X
- 50S ribosomal protein L28
- Chain d
- 50S ribosomal protein L34
- Chain e
- 50S ribosomal protein L35
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