HL_6Q98_126

3D structure

PDB id

6Q98 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

UAAAGUUAAUACCUUUG

Length

17 nucleotides

Bulged bases

6Q98|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Q98|1|2|U|458
6Q98|1|2|A|459
6Q98|1|2|A|460
6Q98|1|2|A|461
6Q98|1|2|G|462
6Q98|1|2|U|463
6Q98|1|2|U|464
6Q98|1|2|A|465
6Q98|1|2|A|466
6Q98|1|2|U|467
6Q98|1|2|A|468
6Q98|1|2|C|469
6Q98|1|2|C|470
6Q98|1|2|U|471
6Q98|1|2|U|472
6Q98|1|2|U|473
6Q98|1|2|G|474

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16