HL_6QNQ_197

3D structure

PDB id

6QNQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome initiation complex (IC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNQ_197 not in the Motif Atlas

Homologous match to HL_5J7L_195

Geometric discrepancy: 0.1124

The information below is about HL_5J7L_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

6QNQ|1|1H|C|2551
6QNQ|1|1H|OMU|2552
6QNQ|1|1H|G|2553
6QNQ|1|1H|U|2554
6QNQ|1|1H|U|2555
6QNQ|1|1H|C|2556
6QNQ|1|1H|G|2557

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains