HL_6QNR_053

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAACAG

Length

7 nucleotides

Bulged bases

6QNR|1|14|C|645

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_053 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.2534

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6QNR|1|14|C|641
6QNR|1|14|G|642
6QNR|1|14|A|643
6QNR|1|14|A|644
6QNR|1|14|C|645
6QNR|1|14|A|646
6QNR|1|14|G|647

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 35

50S ribosomal protein L15

Chain K5

50S ribosomal protein L33

Chain M5

50S ribosomal protein L35