HL_6QNR_068

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGCAAAUCC

Length

9 nucleotides

Bulged bases

6QNR|1|14|C|1493, 6QNR|1|14|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_068 not in the Motif Atlas

Geometric match to HL_2A43_001

Geometric discrepancy: 0.3767

The information below is about HL_2A43_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86621.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6QNR|1|14|G|1491
6QNR|1|14|G|1492
6QNR|1|14|C|1493
6QNR|1|14|A|1494
6QNR|1|14|A|1495
6QNR|1|14|A|1496
6QNR|1|14|U|1497
6QNR|1|14|C|1498
6QNR|1|14|C|1499

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L2