HL_6QNR_086

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_086 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.2201

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

6QNR|1|14|G|2303
6QNR|1|14|G|2304
6QNR|1|14|A|2305
6QNR|1|14|C|2306
6QNR|1|14|G|2307
6QNR|1|14|G|2308
6QNR|1|14|A|2309
6QNR|1|14|A|2310
6QNR|1|14|A|2311
6QNR|1|14|U|2312
6QNR|1|14|C|2313

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 49

50S ribosomal protein L5