HL_6QNR_092

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUGAAGAAGG

Length

10 nucleotides

Bulged bases

6QNR|1|14|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_092 not in the Motif Atlas

Geometric match to HL_3W3S_002

Geometric discrepancy: 0.3294

The information below is about HL_3W3S_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

Anticodon loop

Motif group

HL_81376.3

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

43

Unit IDs

6QNR|1|14|C|2527
6QNR|1|14|U|2528
6QNR|1|14|G|2529
6QNR|1|14|A|2530
6QNR|1|14|A|2531
6QNR|1|14|G|2532
6QNR|1|14|A|2533
6QNR|1|14|A|2534
6QNR|1|14|G|2535
6QNR|1|14|G|2536

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 59

50S ribosomal protein L6