HL_6QNR_142

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6QNR_142 not in the Motif Atlas

Homologous match to HL_7RQB_008

Geometric discrepancy: 0.0552

The information below is about HL_7RQB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_67216.7

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

9

Unit IDs

6QNR|1|1H|C|236
6QNR|1|1H|G|237
6QNR|1|1H|G|238
6QNR|1|1H|C|239
6QNR|1|1H|G|240
6QNR|1|1H|A|241
6QNR|1|1H|G|242

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 3K

Transfer RNA; tRNA

Chain 78

50S ribosomal protein L15

Chain J8

50S ribosomal protein L28

Chain Q8

50S ribosomal protein L35